Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDR48421.1Response regulator receiver domain protein; KEGG: vfi:VF1296 1.4e-21 luxQ; sensor protein LuxQ; COG: COG2203 FOG: GAF domain; Psort location: Cytoplasmic, score: 8.87. (149 aa)    
Predicted Functional Partners:
EDR48420.1
Hypothetical protein; KEGG: mma:MM3205 3.8e-07 two component system histidine kinase K02484; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.87.
 
     0.889
EDR48419.1
HD domain protein; KEGG: ava:Ava_1777 1.5e-43 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.851
EDR48218.1
Hypothetical protein; KEGG: abo:ABO_0442 8.9e-07 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.769
EDR46491.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: ava:Ava_1777 1.6e-43 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score: 9.98.
 
  
 0.756
EDR46154.1
Hpt domain protein; KEGG: syn:slr2098 5.2e-06 hik21; two-component hybrid histidine kinase K07678; Psort location: Cytoplasmic, score: 8.87.
 
   0.737
EDR48418.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: vfi:VF0494 2.7e-10 sensory transduction protein kinase; COG: COG0840 Methyl-accepting chemotaxis protein; Psort location: Cytoplasmic, score: 8.87.
    0.730
EDR46541.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: vfi:VF0494 1.4e-45 sensory transduction protein kinase; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.678
EDR48417.1
Hypothetical protein.
  
 
 0.615
EDR45680.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bme:BMEI0947 1.5e-24 sensory transduction protein kinase; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score: 9.49.
  
   0.578
EDR48198.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bca:BCE_2042 3.3e-53 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   0.494
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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