Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR48442.1Penicillin-binding protein, transpeptidase domain protein; KEGG: saa:SAUSA300_0032 1.8e-102 mecA; penicillin-binding protein 2' K02545; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.49. (703 aa)    
Predicted Functional Partners:
EDR47793.1
Hypothetical protein; COG: COG1589 Cell division septal protein.
 
 
 0.815
EDR48443.1
Hypothetical protein; KEGG: chu:CHU_1842 0.00096 cel; candidate retaining b-glycosidase, glycoside hydrolase family 5 protein K01179; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR48444.1
Hypothetical protein.
       0.768
EDR47052.1
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 0.733
EDR47794.1
COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 0.724
EDR47804.1
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 
 0.669
EDR48441.1
CHAP domain protein; COG: COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
     0.659
EDR46292.1
Septum formation initiator; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.633
EDR47120.1
Putative ATP synthase F0, A subunit; COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 
 0.632
EDR48398.1
Hypothetical protein; COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the SEDS family.
 
 
 0.601
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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