close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48442.1Penicillin-binding protein, transpeptidase domain protein; KEGG: saa:SAUSA300_0032 1.8e-102 mecA; penicillin-binding protein 2' K02545; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.49. (703 aa)    
Predicted Functional Partners:
EDR47793.1
Hypothetical protein; COG: COG1589 Cell division septal protein.
 
 
 0.906
EDR47049.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: sde:Sde_3341 9.2e-54 PAS/PAC sensor signal transduction histidine kinase K05364; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
0.787
EDR48443.1
Hypothetical protein; KEGG: chu:CHU_1842 0.00096 cel; candidate retaining b-glycosidase, glycoside hydrolase family 5 protein K01179; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR48444.1
Hypothetical protein.
       0.768
EDR47797.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: swo:Swol_0820 2.1e-92 peptidoglycan glycosyltransferase K05364; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 
0.767
EDR47798.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: cac:CAC0329 3.7e-77 spoVD; sporulation specific penicillin-binding protein K03587; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.83.
  
 
 
0.759
EDR47052.1
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 0.744
EDR47794.1
COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 0.736
EDR48053.1
Transglycosylase; KEGG: swo:Swol_1109 1.1e-88 peptidoglycan glycosyltransferase K05364; COG: COG0744 Membrane carboxypeptidase (penicillin-binding protein); Psort location: Extracellular, score: 9.55.
 
 
 0.706
EDR47804.1
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 0.682
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.