Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR48376.1ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 3.3e-46 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (234 aa)    
Predicted Functional Partners:
EDR48377.1
Efflux ABC transporter, permease protein; KEGG: chu:CHU_0040 6.0e-09 ATPase involved in DNA repair K03546; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
    0.938
EDR45820.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.26.
  
 
 0.925
EDR48375.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.773
EDR48374.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.504
EDR47267.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
   0.497
pstB-2
KEGG: vpa:VP0576 2.8e-56 phosphate ABC transporter, ATP-binding protein K02036; COG: COG1117 ABC-type phosphate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
   
0.443
EDR45743.1
Putative flagellar protein FliS; KEGG: pen:PSEEN3042 9.8e-64 macB; macrolide ABC efflux protein MacB; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.410
EDR47057.1
KEGG: lmf:LMOf2365_1848 0.0085 protein kinase, putative K08884.
  
 
 0.408
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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