STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48398.1Hypothetical protein; COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the SEDS family. (472 aa)    
Predicted Functional Partners:
EDR47793.1
Hypothetical protein; COG: COG1589 Cell division septal protein.
  
 
 0.876
EDR48397.1
Transcriptional regulator, PadR family; KEGG: pho:PH1406 0.0014 threonine synthase K01733; COG: COG1695 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
 
    0.843
EDR46292.1
Septum formation initiator; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.720
EDR47119.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: mta:Moth_0911 2.6e-62 peptidoglycan glycosyltransferase K05364; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.637
EDR47798.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: cac:CAC0329 3.7e-77 spoVD; sporulation specific penicillin-binding protein K03587; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.83.
 
 
 0.615
EDR47797.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: swo:Swol_0820 2.1e-92 peptidoglycan glycosyltransferase K05364; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.613
EDR48442.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: saa:SAUSA300_0032 1.8e-102 mecA; penicillin-binding protein 2' K02545; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.601
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
  
 0.581
EDR48399.1
HDIG domain protein; COG: COG2316 Predicted hydrolase (HD superfamily); Psort location: Cytoplasmic, score: 8.87.
       0.572
EDR47049.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: sde:Sde_3341 9.2e-54 PAS/PAC sensor signal transduction histidine kinase K05364; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.566
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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