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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48403.1KEGG: rha:RHA1_ro08170 2.6e-09 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99. (253 aa)    
Predicted Functional Partners:
EDR48402.1
Hypothetical protein; KEGG: aci:ACIAD1512 0.0066 putative dibenzothiophene desulfurization enzyme B K05977; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 
 0.969
EDR48401.1
ABC transporter, ATP-binding protein; KEGG: azo:azo2392 3.0e-52 tauB; putative sulfonate transport system, ATP-binding protein; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.952
EDR45672.1
ABC transporter, ATP-binding protein; KEGG: mja:MJ0412 5.4e-53 tauB; putative taurine transport system ATP-binding protein K02049; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.912
EDR45679.1
Hypothetical protein; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 
 0.890
EDR47163.1
KEGG: reh:H16_A2382 5.0e-43 ABC-type transporter, ATPase component: NitT family; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.827
EDR48404.1
Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; KEGG: zmo:ZMO1264 6.3e-107 rspA; putative mandelate racemase K01781; COG: COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Psort location: Cytoplasmic, score: 8.87; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.686
EDR47164.1
KEGG: rha:RHA1_ro08170 5.1e-18 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.633
EDR48603.1
Hypothetical protein; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
 
 0.597
EDR48062.1
Hypothetical protein; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
 
 0.597
EDR45673.1
Hypothetical protein.
 
     0.530
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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