STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48208.1Hypothetical protein; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (108 aa)    
Predicted Functional Partners:
EDR48402.1
Hypothetical protein; KEGG: aci:ACIAD1512 0.0066 putative dibenzothiophene desulfurization enzyme B K05977; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 
 0.911
EDR48401.1
ABC transporter, ATP-binding protein; KEGG: azo:azo2392 3.0e-52 tauB; putative sulfonate transport system, ATP-binding protein; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.890
EDR45672.1
ABC transporter, ATP-binding protein; KEGG: mja:MJ0412 5.4e-53 tauB; putative taurine transport system ATP-binding protein K02049; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.869
EDR45679.1
Hypothetical protein; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 
 0.869
EDR47163.1
KEGG: reh:H16_A2382 5.0e-43 ABC-type transporter, ATPase component: NitT family; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.742
EDR45676.1
KEGG: rha:RHA1_ro08170 9.5e-17 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.654
EDR48603.1
Hypothetical protein; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
   0.585
EDR48062.1
Hypothetical protein; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
   0.585
EDR48209.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.572
EDR45671.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.549
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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