Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
EDR48221.1LytTr DNA-binding domain protein; KEGG: rru:Rru_A0376 7.6e-12 transcriptional regulator, LytR/AlgR family K07705; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score: 8.87. (244 aa)    
Predicted Functional Partners:
EDR45694.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gme:Gmet_2698 2.7e-67 histidine kinase internal region K07704; COG: COG3275 Putative regulator of cell autolysis; Psort location: CytoplasmicMembrane, score: 9.97.
 
 
 0.856
EDR48220.1
Hypothetical protein; KEGG: tte:TTE0562 2.9e-07 baeS2; sensory transduction histidine kinases K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.837
EDR47324.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC01848 5.7e-58 yesM; two-component sensor kinase YesM K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.834
EDR47036.1
HAMP domain protein; KEGG: bli:BL01744 5.2e-48 histidine kinase,histidine kinase, HAMP region; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score: 9.98.
 
  
 0.723
EDR46784.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bha:BH3447 2.0e-64 two-component sensor histidine kinase K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
  
 0.678
EDR48222.1
Hypothetical protein.
       0.499
EDR48219.1
Hypothetical protein.
       0.490
EDR47474.1
Hypothetical protein; KEGG: tte:TTE0562 7.8e-19 baeS2; sensory transduction histidine kinases K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score: 9.97.
 
  
 0.411
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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