STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48223.1Beta-lactamase; KEGG: mma:MM3157 3.1e-50 putative 6-aminohexanoate-dimer hydrolase; COG: COG1680 Beta-lactamase class C and other penicillin binding proteins; Psort location: Cytoplasmic, score: 8.87. (604 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.841
EDR47001.1
Tetratricopeptide repeat protein; KEGG: mth:MTH977 9.7e-10 endo-1,4-beta-glucanase related protein K01179; COG: COG3291 FOG: PKD repeat.
  
 
 0.572
EDR48224.1
Hypothetical protein.
       0.535
EDR48225.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.535
EDR47871.1
Glycosyltransferase, group 1 family protein; KEGG: gox:GOX1125 3.6e-24 glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
     0.482
EDR46785.1
Hypothetical protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
  
     0.463
EDR47652.1
KEGG: bca:BCE_2849 5.0e-34 N-acetylmuramoyl-L-alanine amidase K01448; COG: COG0860 N-acetylmuramoyl-L-alanine amidase.
    
 0.442
EDR48445.1
Putative regulatory protein blaR1; KEGG: bsu:BG11507 3.6e-40 ybxI, ybdS; similar to beta-lactamase K01467; COG: COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
 
   
 0.439
EDR47873.1
Glycosyltransferase, group 1 family protein; KEGG: gox:GOX1125 8.5e-27 glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
     0.437
EDR46727.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.431
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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