STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48224.1Hypothetical protein. (191 aa)    
Predicted Functional Partners:
EDR48225.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
    
0.837
EDR45564.1
Transcriptional regulator, TetR family; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
  
     0.621
EDR48226.1
Hypothetical protein.
       0.545
EDR48223.1
Beta-lactamase; KEGG: mma:MM3157 3.1e-50 putative 6-aminohexanoate-dimer hydrolase; COG: COG1680 Beta-lactamase class C and other penicillin binding proteins; Psort location: Cytoplasmic, score: 8.87.
       0.535
EDR47828.1
YcbB domain protein; KEGG: eci:UTI89_C4457 5.9e-11 glnG; nitrogen regulation protein NR(I) K07712; COG: COG0784 FOG: CheY-like receiver; Psort location: Cytoplasmic, score: 8.87.
  
     0.533
EDR45559.1
Hypothetical protein; KEGG: tte:TTE1875 3.2e-05 fabH4; 3-oxoacyl-(acyl-carrier-protein) synthase III; COG: NOG06474 non supervised orthologous group.
  
     0.532
EDR48614.1
Transcriptional regulator, TetR family; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
  
     0.526
EDR45671.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.512
pfoR
Perfringolysin O regulator protein; KEGG: lin:lin0377 9.0e-10 similar to PTS system, fructose-specific enzyme IIBC component K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.510
EDR45673.1
Hypothetical protein.
  
     0.505
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.