Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR48230.1Glycosyltransferase, group 1 family protein; KEGG: mma:MM1142 4.1e-13 glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87. (453 aa)    
Predicted Functional Partners:
EDR48231.1
Hypothetical protein; KEGG: rru:Rru_A1420 0.0097 NADH dehydrogenase (quinone) K05903; COG: COG4267 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.956
EDR48232.1
CotH protein; COG: COG5337 Spore coat assembly protein.
 
    0.941
EDR48229.1
COG: COG4878 Uncharacterized protein conserved in bacteria.
 
    0.914
EDR48227.1
Hypothetical protein; KEGG: lil:LA0051 0.0019 dTDPglucose 4,6-dehydratase K01710; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
 
    0.904
EDR48228.1
Hypothetical protein; COG: NOG22457 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.902
EDR48233.1
VTC domain protein; COG: NOG21724 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.889
EDR48234.1
Hypothetical protein; COG: NOG16635 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.833
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.560
EDR47852.1
KEGG: tcx:Tcr_1675 1.1e-72 undecaprenyl-phosphate galactosephosphotransferase K03606; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.489
EDR45525.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 9.7e-63 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.485
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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