STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48232.1CotH protein; COG: COG5337 Spore coat assembly protein. (591 aa)    
Predicted Functional Partners:
EDR48231.1
Hypothetical protein; KEGG: rru:Rru_A1420 0.0097 NADH dehydrogenase (quinone) K05903; COG: COG4267 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
     0.974
EDR48233.1
VTC domain protein; COG: NOG21724 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.950
EDR48230.1
Glycosyltransferase, group 1 family protein; KEGG: mma:MM1142 4.1e-13 glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
    0.942
EDR48234.1
Hypothetical protein; COG: NOG16635 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.926
EDR48228.1
Hypothetical protein; COG: NOG22457 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.905
EDR48229.1
COG: COG4878 Uncharacterized protein conserved in bacteria.
 
     0.905
EDR48227.1
Hypothetical protein; KEGG: lil:LA0051 0.0019 dTDPglucose 4,6-dehydratase K01710; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
 
    0.903
EDR48145.1
Hypothetical protein; KEGG: noc:Noc_2789 0.0010 phosphatase KdsC K03270; Psort location: CytoplasmicMembrane, score: 7.80.
  
     0.572
EDR47857.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.560
EDR48226.1
Hypothetical protein.
       0.450
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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