STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
galEKEGG: bsu:BG11837 4.9e-123 galE; UDP-glucose 4-epimerase K01784; COG: COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (344 aa)    
Predicted Functional Partners:
EDR46788.1
GHMP kinase, N-terminal domain protein; KEGG: dde:Dde_3653 3.7e-70 galactokinase K00849; COG: COG0153 Galactokinase; Psort location: Cytoplasmic, score: 8.87; Belongs to the GHMP kinase family.
 
 
 0.965
galT
UTP--hexose-1-phosphate uridylyltransferase; KEGG: cac:CAC2961 1.1e-143 galT; galactose-1-phosphate uridyltransferase K00964; COG: COG4468 Galactose-1-phosphate uridyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.942
glf
KEGG: msu:MS0661 8.9e-140 glf; UDP-galactopyranose mutase K01854; COG: COG0562 UDP-galactopyranose mutase; Psort location: Cytoplasmic, score: 8.87.
    
 0.924
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
    
 0.853
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
       0.779
EDR48249.1
DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
       0.773
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
     
 0.769
EDR46537.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 0.724
EDR48247.1
Hypothetical protein; KEGG: hma:rrnAC1081 5.4e-05 rffH1; glucose-1-phosphate thymidylyltransferase K00973; COG: NOG09722 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
     
 0.557
EDR47884.1
Glycosyltransferase, group 2 family protein; KEGG: lsl:LSL_0696 2.4e-34 rfaG; glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.546
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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