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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaBReplicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (446 aa)    
Predicted Functional Partners:
EDR48138.1
Hypothetical protein; KEGG: mge:MG_010 3.1e-05 DNA primase K02316.
  
 0.982
EDR45454.1
Hypothetical protein; KEGG: pfo:Pfl_0538 5.3e-05 DnaB helicase K02314; COG: NOG14428 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
 0.982
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
 0.974
EDR45417.1
CHC2 zinc finger domain protein; KEGG: ttj:TTHA1260 1.5e-12 DNA primase K02316; COG: COG0358 DNA primase (bacterial type); Psort location: Cytoplasmic, score: 8.87.
  
 0.930
EDR45438.1
CHC2 zinc finger domain protein; KEGG: dvu:DVU1789 2.2e-15 dnaG; DNA primase K02316; COG: COG0358 DNA primase (bacterial type); Psort location: Cytoplasmic, score: 8.87.
  
 0.930
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 
 0.926
EDR46263.1
DNA replication protein DnaC; KEGG: spi:MGAS10750_Spy1680 1.2e-15 replicative DNA helicase K01529; COG: COG1484 DNA replication protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.894
EDR48161.1
Hypothetical protein; KEGG: spi:MGAS10750_Spy1680 6.0e-15 replicative DNA helicase K01529; COG: COG1484 DNA replication protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.893
EDR48162.1
Hypothetical protein; KEGG: spi:MGAS10750_Spy1680 2.0e-14 replicative DNA helicase K01529; COG: COG1484 DNA replication protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.893
EDR45685.1
Hypothetical protein.
   
 
 0.889
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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