close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48268.1Lantibiotic protection ABC transporter, ATP-binding subunit; KEGG: fal:FRAAL3681 2.2e-40 putative ABC transporter ATP-binding protein; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (237 aa)    
Predicted Functional Partners:
EDR48269.1
Lantibiotic protection ABC transporter permease subunit, MutE/EpiE family; COG: NOG17940 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.962
EDR48270.1
Lantibiotic protection ABC transporter permease subunit, MutG family; COG: NOG31276 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.959
EDR48272.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC00629 7.5e-72 spaK; subtilin biosynthesis sensor protein SpaK; COG: COG0642 Signal transduction histidine kinase.
 
     0.914
EDR48271.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 2.5e-32 response regulator in two-component regulatory system; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
 
     0.846
EDR47966.1
ABC transporter, solute-binding protein; KEGG: cdi:DIP0495 4.0e-08 putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017:K02018; COG: COG0687 Spermidine/putrescine-binding periplasmic protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
  0.732
EDR46567.1
CAAX amino terminal protease family protein; COG: COG1668 ABC-type Na+ efflux pump, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.673
EDR48267.1
Hypothetical protein.
       0.556
EDR46696.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
  0.535
EDR48201.1
Hypothetical protein; KEGG: tvo:TVN0733 0.0065 putative cytochrome bd-I oxidase subunit II K00426; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
   
  0.527
EDR46677.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
   
  0.527
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.