STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48100.1Hypothetical protein; COG: COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component. (412 aa)    
Predicted Functional Partners:
EDR48102.1
Hypothetical protein; KEGG: reh:H16_A3653 1.5e-27 ABC-type transporter, ATPase and permease components; COG: COG4177 ABC-type branched-chain amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.989
EDR48101.1
Hypothetical protein; KEGG: rha:RHA1_ro10323 8.1e-27 ABC branched chain amino acid transporter ATP-binding subunit; COG: COG0559 Branched-chain amino acid ABC-type transport system, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.983
EDR48103.1
Hypothetical protein; KEGG: bur:Bcep18194_A5827 1.8e-61 ABC branched-chain amino acid family transporter, ATPase subunit K01995; COG: COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 0.980
EDR48104.1
Hypothetical protein; KEGG: bur:Bcep18194_A5826 4.7e-70 ABC branched-chain amino acid family transporter, ATPase subunit K01996; COG: COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
    0.872
EDR48349.1
ANTAR domain protein; COG: COG3707 Response regulator with putative antiterminator output domain.
  
 
 0.818
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.