STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48107.1Hypothetical protein; KEGG: fnu:FN1791 4.3e-12 mutator MutT protein K03574; COG: COG3323 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. (121 aa)    
Predicted Functional Partners:
EDR48108.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR48109.1
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.
       0.773
EDR48501.1
TIGR00730 family protein; KEGG: reh:H16_A1025 2.3e-29 predicted Rossmann fold nucleotide-binding protein / lysine decarboxylase family protein K01592; COG: COG1611 Predicted Rossmann fold nucleotide-binding protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the LOG family.
 
      0.613
EDR48110.1
Hypothetical protein; KEGG: reh:H16_A0527 3.4e-20 phoH; phosphate starvation-inducible protein PhoH,predicted ATPase; COG: COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH; Psort location: Cytoplasmic, score: 9.98.
       0.506
EDR48111.1
HDIG domain protein, AMBIGUITY; COG: NOG09580 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.403
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.