STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR48120.1COG: COG2364 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.97. (243 aa)    
Predicted Functional Partners:
purC
KEGG: gsu:GSU2091 1.0e-83 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; COG: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; Psort location: Cytoplasmic, score: 8.87; Belongs to the SAICAR synthetase family.
       0.773
EDR48125.1
COG: COG4485 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.520
EDR46734.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.470
EDR45955.1
Hypothetical protein; KEGG: azo:azo2810 1.3e-06 conserved hypothetical protein K01010; COG: NOG13526 non supervised orthologous group.
  
     0.463
EDR48309.1
Hypothetical protein; COG: NOG14245 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.459
EDR48122.1
Hypothetical protein; KEGG: ctc:CTC01905 2.2e-31 sensory transduction protein kinase; COG: COG2205 Osmosensitive K+ channel histidine kinase; Psort location: CytoplasmicMembrane, score: 7.73.
       0.420
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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