Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR48122.1Hypothetical protein; KEGG: ctc:CTC01905 2.2e-31 sensory transduction protein kinase; COG: COG2205 Osmosensitive K+ channel histidine kinase; Psort location: CytoplasmicMembrane, score: 7.73. (475 aa)    
Predicted Functional Partners:
EDR48123.1
Hypothetical protein; KEGG: ava:Ava_1878 2.2e-33 two component transcriptional regulator, winged helix family K07659; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.65.
 
   0.896
EDR48087.1
Putative phage capsid family; COG: NOG20168 non supervised orthologous group.
  
     0.488
EDR48124.1
Hypothetical protein; KEGG: lsa:LSA1519 1.2e-96 putative teichoic acid/polysaccharide glycosyl transferase, family 2 K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
     
 0.485
EDR46039.1
Response regulator receiver domain protein; KEGG: ava:Ava_3369 1.2e-34 two component transcriptional regulator, winged helix family; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
 
   0.453
EDR46109.1
KEGG: rha:RHA1_ro05622 2.2e-33 response regulator (protein-glutamate methylesterase) K07669; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
  
   0.453
EDR48125.1
COG: COG4485 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.449
EDR45823.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 4.8e-29 two component transcriptional regulator, winged helix family K07659; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
  
   0.433
EDR48089.1
Hypothetical protein.
  
    0.427
EDR48120.1
COG: COG2364 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.97.
       0.420
purC
KEGG: gsu:GSU2091 1.0e-83 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; COG: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; Psort location: Cytoplasmic, score: 8.87; Belongs to the SAICAR synthetase family.
       0.420
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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