STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR48125.1COG: COG4485 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99. (936 aa)    
Predicted Functional Partners:
EDR48124.1
Hypothetical protein; KEGG: lsa:LSA1519 1.2e-96 putative teichoic acid/polysaccharide glycosyl transferase, family 2 K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.882
EDR46847.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.565
EDR47518.1
Hypothetical protein; KEGG: rno:309804 1.3e-25 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: COG1340 Uncharacterized archaeal coiled-coil protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.541
EDR48120.1
COG: COG2364 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.97.
 
     0.520
EDR46092.1
Putative phage head-tail adaptor; KEGG: mpe:MYPE6470 1.3e-05 parC; DNA topoisomerase IV subunit A K02621; COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 10.00.
  
     0.515
EDR48123.1
Hypothetical protein; KEGG: ava:Ava_1878 2.2e-33 two component transcriptional regulator, winged helix family K07659; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.65.
       0.509
EDR48126.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.507
EDR46849.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.480
EDR47903.1
Hypothetical protein.
  
     0.473
EDR46868.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.469
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.