STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48140.1Hypothetical protein; KEGG: bca:BCE_0840 6.5e-16 type I restriction-modification system, R subunit K01153; COG: COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; Psort location: Cytoplasmic, score: 8.87. (111 aa)    
Predicted Functional Partners:
EDR46670.1
Hypothetical protein.
  
 
 0.846
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.787
EDR48138.1
Hypothetical protein; KEGG: mge:MG_010 3.1e-05 DNA primase K02316.
       0.773
EDR48139.1
Hypothetical protein.
       0.773
EDR46752.1
COG: COG1715 Restriction endonuclease; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.509
EDR48141.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.476
EDR48137.1
Hypothetical protein; KEGG: lsa:LSA1190 1.7e-24 putative 4-carboxymuconolactone decarboxylase K01607; COG: COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; Psort location: Cytoplasmic, score: 8.87.
       0.450
EDR46036.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.434
EDR48136.1
Flavodoxin; KEGG: hso:HS_1210 0.00053 fldA; flavodoxin K03839; COG: COG0716 Flavodoxins.
       0.403
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.