STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR48166.1KEGG: bha:BH2238 1.4e-24 protein-tyrosine-phosphatase K01104; COG: COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (142 aa)    
Predicted Functional Partners:
EDR47664.1
Hypothetical protein.
  
   0.736
maf
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
    0.697
EDR45738.1
YihY family protein; KEGG: cno:NT01CX_1516 9.9e-38 ribonuclease BN, putative; COG: COG1295 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the UPF0761 family.
  
  
 0.602
EDR48167.1
Hypothetical protein; Component of the transport system for branched-chain amino acids.
       0.541
EDR48164.1
Transposase; COG: COG4974 Site-specific recombinase XerD; Psort location: Cytoplasmic, score: 8.87.
       0.431
EDR48165.1
Transposase; COG: COG4974 Site-specific recombinase XerD; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family.
       0.431
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.