STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48185.1Hypothetical protein; COG: COG3666 Transposase and inactivated derivatives. (291 aa)    
Predicted Functional Partners:
EDR48186.1
Hypothetical protein; COG: COG3666 Transposase and inactivated derivatives.
     0.989
EDR48549.1
Hypothetical protein; COG: COG3666 Transposase and inactivated derivatives.
 
     0.838
EDR48560.1
Hypothetical protein; COG: COG3666 Transposase and inactivated derivatives.
 
     0.730
EDR48184.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.458
EDR48183.1
Hydrolase, alpha/beta domain protein; KEGG: fal:FRAAL0236 9.9e-17 putative esterase K01066; COG: COG0657 Esterase/lipase; Psort location: Cytoplasmic, score: 8.87.
       0.406
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.