STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48187.1Transporter, lactate permease (LctP) family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (571 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.655
EDR45569.1
KEGG: cpr:CPR_0550 2.6e-163 fructose specific permease K00890; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.495
EDR48188.1
Putative dihydroxyacetone kinase regulator; COG: COG1309 Transcriptional regulator.
 
     0.486
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
  
 0.475
EDR45953.1
Hypothetical protein; KEGG: sat:SYN_00363 5.2e-32 glutamate synthase [NADPH] small chain K00264; COG: COG0247 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.467
EDR48183.1
Hydrolase, alpha/beta domain protein; KEGG: fal:FRAAL0236 9.9e-17 putative esterase K01066; COG: COG0657 Esterase/lipase; Psort location: Cytoplasmic, score: 8.87.
  
     0.461
EDR48181.1
Hydrolase, alpha/beta domain protein; KEGG: bcz:BCZK0735 2.9e-20 lipW; possible esterase K01066; COG: COG0657 Esterase/lipase; Psort location: Cytoplasmic, score: 9.98.
  
     0.414
EDR48191.1
Putative glycine reductase, subunit ABC; KEGG: chy:CHY_2391 2.2e-49 grdE; glycine reductase proprotein GrdE; COG: NOG06476 non supervised orthologous group.
  
     0.411
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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