Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDR47915.1KEGG: shn:Shewana3_3300 1.8e-13 chromate transporter, chromate ion transporter (CHR) family K00229; COG: COG2059 Chromate transport protein ChrA; Psort location: CytoplasmicMembrane, score: 9.99. (187 aa)    
Predicted Functional Partners:
EDR47916.1
KEGG: shn:Shewana3_3300 3.0e-13 chromate transporter, chromate ion transporter (CHR) family K00229; COG: COG2059 Chromate transport protein ChrA; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
0.927
EDR47917.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: ava:Ava_3100 2.1e-44 aldo/keto reductase K05885; COG: COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); Psort location: Cytoplasmic, score: 8.87.
  
    0.730
EDR47914.1
Hypothetical protein; COG: COG4887 Uncharacterized metal-binding protein conserved in archaea; Psort location: Cytoplasmic, score: 8.87.
       0.576
EDR47918.1
KEGG: dra:DRA0143 1.2e-55 3-hydroxyacyl-CoA dehydrogenase, putative K00022; COG: COG1250 3-hydroxyacyl-CoA dehydrogenase.
       0.468
EDR47913.1
Metallo-beta-lactamase domain protein; KEGG: nmu:Nmul_A1621 0.0028 hydroxyacylglutathione hydrolase K01069; COG: COG2247 Putative cell wall-binding domain.
  
    0.439
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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