STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47957.12Fe-2S iron-sulfur cluster-binding domain protein; KEGG: sto:ST0561 6.8e-30 carbon monoxide dehydrogenase K03518; COG: COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; Psort location: Cytoplasmic, score: 8.87. (161 aa)    
Predicted Functional Partners:
EDR47956.1
KEGG: mta:Moth_1960 2.2e-120 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K00087; COG: COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.999
EDR47958.1
FAD binding domain in molybdopterin dehydrogenase; KEGG: mtu:Rv0375c 1.0e-08 carbon monoxide dehydrogenase K03519; COG: COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.996
EDR47491.1
Putative xanthine dehydrogenase accessory factor; KEGG: bch:Bcen2424_1020 2.4e-11 adenosine deaminase K01488; COG: COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.857
EDR46540.1
Hypothetical protein; KEGG: hma:pNG7236 1.1e-13 glmU; UDP-N-acetylglucosamine pyrophosphorylase K00972; COG: COG2068 Uncharacterized MobA-related protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.850
EDR47489.1
Selenium-dependent molybdenum hydroxylase system protein, YqeB family; COG: COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.707
yqeC
Putative selenium-dependent hydroxylase accessory protein YqeC; COG: NOG13189 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.694
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
     
 0.636
EDR47959.1
Response regulator receiver domain protein; KEGG: azo:azo2482 1.2e-89 putative hybrid sensor and regulator; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
       0.509
EDR47960.1
ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 4.1e-16 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: Cytoplasmic, score: 8.87.
       0.509
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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