STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47960.1ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 4.1e-16 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: Cytoplasmic, score: 8.87. (261 aa)    
Predicted Functional Partners:
EDR48004.1
KEGG: sma:SAV6546 1.6e-23 putative ABC transporter permease K02028; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.915
EDR45856.1
KEGG: hpa:HPAG1_0922 9.0e-28 amino acid ABC transporter, permease protein; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.778
EDR47343.1
KEGG: hpa:HPAG1_0922 1.0e-28 amino acid ABC transporter, permease protein; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.774
EDR47959.1
Response regulator receiver domain protein; KEGG: azo:azo2482 1.2e-89 putative hybrid sensor and regulator; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
       0.773
EDR48003.1
ABC transporter, ATP-binding protein; KEGG: mst:Msp_0958 2.3e-93 predicted ABC-type polar amino acid transport system, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 0.750
EDR45857.1
ABC transporter, substrate-binding protein, family 3; KEGG: bur:Bcep18194_A4695 2.4e-20 ABC polar amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.743
EDR46791.1
KEGG: hpa:HPAG1_1108 6.7e-55 glutamine ABC transporter, permease protein; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.741
EDR46792.1
KEGG: hpa:HPAG1_1109 5.2e-48 glutamine ABC transporter, permease protein; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.737
EDR47342.1
ABC transporter, ATP-binding protein; KEGG: cpe:CPE0602 3.1e-73 probable amino acid ABC transporter K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 0.700
EDR46793.1
ABC transporter, ATP-binding protein; KEGG: hhe:HH0347 5.7e-81 glnQ_1; conserved hypothetical protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 0.691
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.