STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47965.1ABC transporter, permease protein; KEGG: syn:sll0739 2.4e-10 modBC; ABC-type molybdate transport system permease/ATP-binding protein K02018; COG: COG1176 ABC-type spermidine/putrescine transport system, permease component I; Psort location: CytoplasmicMembrane, score: 10.00. (275 aa)    
Predicted Functional Partners:
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
  
 0.992
EDR47966.1
ABC transporter, solute-binding protein; KEGG: cdi:DIP0495 4.0e-08 putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017:K02018; COG: COG0687 Spermidine/putrescine-binding periplasmic protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
0.959
EDR45901.1
ABC transporter, ATP-binding protein; KEGG: dra:DR2153 2.4e-114 putative polar amino acid transport system ATP-binding protein K02028; COG: COG3839 ABC-type sugar transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49; Belongs to the ABC transporter superfamily.
 
 0.882
EDR46212.1
ABC transporter, ATP-binding protein; KEGG: dra:DR2153 2.7e-44 putative polar amino acid transport system ATP-binding protein K02028; COG: COG3839 ABC-type sugar transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.879
EDR47963.1
Cupin domain protein; KEGG: psp:PSPPH_2917 2.8e-05 DNA-binding protein K00517; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
 
     0.722
EDR47040.1
COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.712
EDR45973.1
KEGG: ava:Ava_0243 7.6e-05 molybdate ABC transporter, permease protein K02018; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.712
EDR46276.1
ABC transporter, permease protein; KEGG: syn:sll0739 2.4e-05 modBC; ABC-type molybdate transport system permease/ATP-binding protein K02018; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.712
EDR46280.1
COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.712
EDR46320.1
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 0.00010 molybdenum ABC transporter ModB K06022; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.712
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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