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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grdCGlycine reductase complex component C, beta subunit; KEGG: tte:TTE1875 1.7e-159 fabH4; 3-oxoacyl-(acyl-carrier-protein) synthase III; COG: NOG06474 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (512 aa)    
Predicted Functional Partners:
plsX
Fatty acid/phospholipid synthesis protein PlsX; KEGG: tde:TDE0239 2.2e-104 grdD; glycine reductase complex protein GrdD; COG: COG0416 Fatty acid/phospholipid biosynthesis enzyme; Psort location: Cytoplasmic, score: 8.87.
  
 0.996
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 
 0.995
EDR48616.1
Hypothetical protein; KEGG: tde:TDE0239 8.2e-14 grdD; glycine reductase complex protein GrdD; COG: NOG07988 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.906
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.900
EDR47991.1
Putative glycine/sarcosine/betaine reductase complex component A1; KEGG: tde:TDE0745 4.9e-36 grdA; glycine reductase complex selenoprotein GrdA; COG: NOG11771 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.895
EDR47992.1
KEGG: chy:CHY_2392 1.2e-14 grdA; glycine reductase, selenoprotein A; COG: NOG11771 non supervised orthologous group.
 
     0.885
EDR47996.1
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; KEGG: chy:CHY_2393 4.2e-117 grdB; glycine reductase, selenoprotein B; COG: NOG06475 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.837
EDR47998.1
Hypothetical protein; COG: NOG19648 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.832
fabD
[acyl-carrier-protein] S-malonyltransferase; KEGG: cac:CAC3575 2.9e-77 fabD; malonyl CoA-acyl carrier protein transacylase K00645; COG: COG0331 (acyl-carrier-protein) S-malonyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.831
EDR47995.1
KEGG: chy:CHY_2393 1.3e-26 grdB; glycine reductase, selenoprotein B; COG: NOG06475 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.824
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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