STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48012.1Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: lwe:lwe2133 3.2e-64 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (255 aa)    
Predicted Functional Partners:
EDR48011.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.995
EDR45820.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.26.
 
 0.987
EDR48013.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: stl:stu1335 3.8e-52 hk07; sensor histidine kinase (homolog to HK01Spn & Sth); COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.893
EDR48014.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 8.7e-30 two component transcriptional regulator, winged helix family K07659; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
 
     0.824
EDR45594.1
KEGG: rru:Rru_A0864 3.1e-73 ABC transporter, transmembrane region K06020; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99.
 
    
0.673
EDR46866.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A0881 4.4e-74 ABC transporter component K06021; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99.
 
    
0.656
EDR47409.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 3.5e-19 ATPase K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
  0.605
EDR47057.1
KEGG: lmf:LMOf2365_1848 0.0085 protein kinase, putative K08884.
  
 
 0.523
EDR45743.1
Putative flagellar protein FliS; KEGG: pen:PSEEN3042 9.8e-64 macB; macrolide ABC efflux protein MacB; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
0.508
EDR48500.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
   
  0.489
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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