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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR48087.1Putative phage capsid family; COG: NOG20168 non supervised orthologous group. (326 aa)    
Predicted Functional Partners:
EDR48083.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.911
EDR48080.1
Bacteriophage Gp15 protein; COG: NOG24969 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.887
EDR48092.1
Phage minor capsid protein; COG: NOG25118 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.866
EDR48093.1
Phage terminase, large subunit, PBSX family; COG: COG1783 Phage terminase large subunit; Psort location: Cytoplasmic, score: 8.87.
 
    0.861
EDR48089.1
Hypothetical protein.
 
     0.854
EDR48091.1
Hypothetical protein; COG: NOG17345 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.829
EDR48094.1
Hypothetical protein; COG: COG5484 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.815
EDR48085.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.787
EDR48084.1
Hypothetical protein.
       0.784
EDR48086.1
Hypothetical protein.
       0.784
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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