STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47682.1Hydrolase, NUDIX family; KEGG: mac:MA0113 2.2e-16 ADP-ribose pyrophosphatase K01529; COG: COG1051 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 8.87. (246 aa)    
Predicted Functional Partners:
EDR47683.1
MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99.
       0.732
nadA
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
  
    0.697
nadC
Nicotinate-nucleotide diphosphorylase (carboxylating); KEGG: fnu:FN0010 1.8e-84 nicotinate-nucleotide pyrophosphorylase K00767; COG: COG0157 Nicotinate-nucleotide pyrophosphorylase; Psort location: Cytoplasmic, score: 8.87; Belongs to the NadC/ModD family.
  
    0.697
EDR45478.1
Alpha amylase, catalytic domain protein; KEGG: fal:FRAAL2309 2.4e-59 cyclomaltodextrinase K01208; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score: 9.98.
 
      0.597
EDR47680.1
KEGG: fnu:FN1462 3.6e-88 transcriptional regulator, GntR family K00375; COG: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; Psort location: Cytoplasmic, score: 9.98.
 
     0.522
glnS
glutamine--tRNA ligase; KEGG: cno:NT01CX_0275 4.5e-200 glnS; glutaminyl-tRNA synthetase K01886; COG: COG0008 Glutamyl- and glutaminyl-tRNA synthetases; Psort location: Cytoplasmic, score: 9.98.
       0.464
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.