STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47720.1Histidine kinase; KEGG: chu:CHU_1265 5.0e-16 narQ; two-component sensor histidine kinase; COG: COG4585 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99. (369 aa)    
Predicted Functional Partners:
EDR47719.1
Response regulator receiver domain protein; KEGG: ava:Ava_2028 1.2e-39 two component transcriptional regulator, LuxR family; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
 
 0.993
vraR
Response regulator protein VraR; KEGG: fal:FRAAL4813 3.8e-20 putative two-component system response regulator; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
 
 0.953
EDR47723.1
Hypothetical protein; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.887
EDR47722.1
Hypothetical protein; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.886
EDR47721.1
KEGG: rha:RHA1_ro04791 6.5e-42 ABC transporter, ATP-binding component K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
    0.880
EDR48485.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC00191 2.5e-55 sensory transduction histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
   
 
 0.752
EDR47828.1
YcbB domain protein; KEGG: eci:UTI89_C4457 5.9e-11 glnG; nitrogen regulation protein NR(I) K07712; COG: COG0784 FOG: CheY-like receiver; Psort location: Cytoplasmic, score: 8.87.
  
 0.634
EDR46814.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.634
EDR45386.1
Hypothetical protein; COG: COG1943 Transposase and inactivated derivatives; Psort location: Extracellular, score: 8.82.
  
 0.634
EDR47717.1
MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99.
       0.585
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.