STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Coexpression
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[Homology]
Score
EDR47733.1DRTGG domain protein; KEGG: ctc:CTC01649 2.0e-126 putative manganese-dependent inorganic pyrophosphatase K01507; COG: COG1227 Inorganic pyrophosphatase/exopolyphosphatase; Psort location: Cytoplasmic, score: 8.87. (549 aa)    
Predicted Functional Partners:
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
 0.911
EDR46245.1
ATP synthase subunit C; KEGG: ctc:CTC02330 6.8e-23 putative V-type sodium ATP synthase subunit K K02124; COG: NOG21876 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
    
 0.911
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
     
 0.909
EDR47536.1
KEGG: tde:TDE1679 9.9e-38 atpK; V-type ATPase, K subunit K02124; COG: COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.905
EDR46246.1
KEGG: mth:MTH956 6.4e-11 ATP synthase, subunit F K02122; COG: COG1436 Archaeal/vacuolar-type H+-ATPase subunit F; Psort location: Cytoplasmic, score: 8.87.
   
 
  0.901
atpA-2
ATP synthase alpha/beta family, nucleotide-binding domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
     
  0.900
atpB-2
ATP synthase alpha/beta family, nucleotide-binding domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
     
  0.900
EDR47534.1
KEGG: tde:TDE1681 9.7e-47 atpD; V-type ATPase, D subunit K02120; COG: COG1394 Archaeal/vacuolar-type H+-ATPase subunit D; Psort location: Cytoplasmic, score: 8.87.
     
  0.900
ppk1-2
Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
     
  0.900
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
     
  0.900
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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