STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47739.1Hypothetical protein; KEGG: eci:UTI89_C4143 8.3e-10 putative autotransport adhesin K01423; COG: COG1511 Predicted membrane protein; Psort location: Cellwall, score: 9.18. (733 aa)    
Predicted Functional Partners:
EDR47740.1
Putative ATP synthase F0, A subunit; COG: COG1033 Predicted exporters of the RND superfamily; Psort location: CytoplasmicMembrane, score: 9.99.
     0.976
EDR47741.1
Transcriptional regulator, TetR family; KEGG: bcl:ABC2937 0.00011 NADH dehydrogenase K03885; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
 
    0.772
EDR47720.1
Histidine kinase; KEGG: chu:CHU_1265 5.0e-16 narQ; two-component sensor histidine kinase; COG: COG4585 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.447
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.