Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pfoRPerfringolysin O regulator protein; KEGG: lin:lin0377 9.0e-10 similar to PTS system, fructose-specific enzyme IIBC component K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 9.99. (354 aa)    
Predicted Functional Partners:
pfkB
1-phosphofructokinase; KEGG: cno:NT01CX_1725 3.2e-87 1-phosphofructokinase K00882; COG: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Psort location: Cytoplasmic, score: 8.87; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.820
EDR47827.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE1202 5.1e-41 baeS6; Sensory transduction histidine kinases K07717; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.817
EDR47828.1
YcbB domain protein; KEGG: eci:UTI89_C4457 5.9e-11 glnG; nitrogen regulation protein NR(I) K07712; COG: COG0784 FOG: CheY-like receiver; Psort location: Cytoplasmic, score: 8.87.
 
     0.816
EDR48615.1
Hypothetical protein; COG: NOG19648 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.562
EDR47169.1
Hypothetical protein.
  
     0.550
EDR45671.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
    0.549
EDR47168.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.545
EDR47998.1
Hypothetical protein; COG: NOG19648 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.544
EDR48224.1
Hypothetical protein.
  
     0.510
EDR45569.1
KEGG: cpr:CPR_0550 2.6e-163 fructose specific permease K00890; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.504
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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