STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47830.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
EDR47831.1
Hypothetical protein; COG: COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.746
EDR47832.1
Hypothetical protein; COG: NOG11065 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.702
EDR47833.1
Site-specific recombinase, phage integrase family; COG: NOG11064 non supervised orthologous group.
       0.702
EDR47834.1
Peptidase, U32 family; KEGG: cac:CAC1687 7.4e-120 collagenase family protease K08303; COG: COG0826 Collagenase and related proteases; Psort location: Cytoplasmic, score: 8.87.
       0.400
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.