STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47848.1Hypothetical protein; KEGG: pfa:PF13_0232 5.1e-11 Casein kinase II regulatory subunit, putative K03115; COG: KOG1477 SPRY domain-containing proteins. (537 aa)    
Predicted Functional Partners:
EDR48006.1
Hypothetical protein.
  
   0.832
EDR47001.1
Tetratricopeptide repeat protein; KEGG: mth:MTH977 9.7e-10 endo-1,4-beta-glucanase related protein K01179; COG: COG3291 FOG: PKD repeat.
  
  
  0.817
EDR47432.1
Tetratricopeptide repeat protein; COG: COG1729 Uncharacterized protein conserved in bacteria.
  
   0.790
EDR46191.1
Hypothetical protein; COG: COG1716 FOG: FHA domain; Psort location: Cytoplasmic, score: 8.87.
  
    0.784
EDR48385.1
Putative phage shock protein B; KEGG: cal:orf19.2859 6.8e-09 SRP40; nonribosomal protein of the nucleolus and coiled bodies K01186; COG: COG5295 Autotransporter adhesin; Psort location: Cellwall, score: 9.93.
  
   
 0.783
EDR48007.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.771
EDR48008.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.771
EDR47518.1
Hypothetical protein; KEGG: rno:309804 1.3e-25 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: COG1340 Uncharacterized archaeal coiled-coil protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.769
EDR46218.1
Tetratricopeptide repeat protein; KEGG: mpe:MYPE6470 3.3e-58 parC; DNA topoisomerase IV subunit A K02621; COG: KOG1181 FOG: Low-complexity; Psort location: Extracellular, score: 7.62.
  
   
 0.768
EDR46312.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 7.63.
  
     0.767
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.