STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47856.1Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 1.6e-68 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87. (562 aa)    
Predicted Functional Partners:
EDR47852.1
KEGG: tcx:Tcr_1675 1.1e-72 undecaprenyl-phosphate galactosephosphotransferase K03606; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.996
EDR45525.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 9.7e-63 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
  
 0.984
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 
 0.943
EDR47855.1
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 1.4e-51 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
 
 
0.937
EDR47870.1
ABC-2 type transporter; COG: COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.908
EDR48227.1
Hypothetical protein; KEGG: lil:LA0051 0.0019 dTDPglucose 4,6-dehydratase K01710; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
  
 0.904
EDR47850.1
Glycosyltransferase, group 2 family protein; KEGG: stm:STM2085 7.9e-52 rfbN; LPS side chain defect: rhamnosyl transferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
 
 0.903
EDR47854.1
Glycosyltransferase, group 1 family protein; KEGG: rba:RB3591 2.2e-12 putative transferase; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
 0.883
EDR47869.1
KEGG: spa:M6_Spy0623 4.7e-54 polysaccharide export ATP-binding protein K01990; COG: COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.868
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
 
 0.858
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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