STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47865.1Hypothetical protein; COG: NOG08812 non supervised orthologous group. (91 aa)    
Predicted Functional Partners:
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.883
EDR47863.1
Methyltransferase domain protein; KEGG: btk:BT9727_3407 2.9e-16 possible ubiquinone/menaquinone methyltransferase K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score: 8.87.
 
     0.635
EDR47864.1
Hypothetical protein.
       0.610
EDR48280.1
Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.562
EDR46241.1
Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.543
EDR45838.1
Hypothetical protein; COG: COG5464 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.531
EDR47867.1
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 2.6e-56 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
   
   0.526
EDR47866.1
Hypothetical protein; KEGG: pfa:PFD0950w 0.0017 ran binding protein 1 K03864; COG: NOG36013 non supervised orthologous group.
       0.524
EDR48400.1
Hypothetical protein; COG: COG5464 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.464
EDR47868.1
Hypothetical protein.
       0.434
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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