Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR47889.1GtrA-like protein; KEGG: gox:GOX0129 1.2e-05 dolichol-phosphate mannosyltransferase K00721; COG: NOG22136 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.26. (136 aa)    
Predicted Functional Partners:
EDR47890.1
Arylsulfatase; KEGG: eba:ebA3535 1.1e-37 mdoB; phosphoglycerol transferase I K01002; COG: COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; Psort location: CytoplasmicMembrane, score: 9.99.
       0.784
EDR47856.1
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 1.6e-68 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.416
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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