Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDR47457.1Hypothetical protein; COG: COG1284 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99. (285 aa)    
Predicted Functional Partners:
sdaAB
L-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: tte:TTE1008 4.5e-49 sdaA; L-serine deaminase K01752; COG: COG1760 L-serine deaminase; Psort location: Cytoplasmic, score: 8.87; Belongs to the iron-sulfur dependent L-serine dehydratase family.
       0.520
sdaAA
KEGG: cno:NT01CX_1254 4.8e-61 sdaAA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752; COG: COG1760 L-serine deaminase; Psort location: Cytoplasmic, score: 8.87.
       0.520
EDR47454.1
Hypothetical protein; COG: COG1284 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
    
0.508
EDR47453.1
Aminopeptidase I zinc metalloprotease (M18); KEGG: cac:CAC1091 2.5e-151 aspartyl aminopeptidase K01269; COG: COG1362 Aspartyl aminopeptidase; Psort location: Cytoplasmic, score: 8.87.
 
     0.505
EDR47450.1
Hypothetical protein; COG: COG5505 Predicted integral membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.462
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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