Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR47458.1Hypothetical protein; COG: NOG25267 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (81 aa)    
Predicted Functional Partners:
EDR47459.1
COG: COG3209 Rhs family protein; Psort location: Cellwall, score: 9.17.
 
     0.709
EDR46770.1
Addiction module toxin, RelE/StbE family; Psort location: Cytoplasmic, score: 8.87.
  
     0.622
EDR45661.1
DNA-binding helix-turn-helix protein; KEGG: blo:BL0712 5.4e-06 aspartate aminotransferase K00812; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.524
EDR46519.1
DNA-binding helix-turn-helix protein; KEGG: blo:BL0712 1.1e-05 aspartate aminotransferase K00812; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.516
EDR46769.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.514
EDR47857.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.444
EDR48584.1
Hypothetical protein; COG: NOG14237 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.435
EDR48375.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.413
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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