STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR47485.1Putative dGTPase; KEGG: cal:orf19.3100 1.3e-14 USO4; coiled-coil protein necessary for protein transport from ER to Golgi K01553; COG: COG4913 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. (1110 aa)    
Predicted Functional Partners:
EDR47484.1
Hypothetical protein; COG: NOG21901 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.954
EDR47483.1
Hypothetical protein; KEGG: tte:TTE1682 2.9e-05 baeS8; sensory transduction histidine kinases K07777; COG: COG1196 Chromosome segregation ATPases; Psort location: Cytoplasmic, score: 8.87.
 
     0.932
EDR47866.1
Hypothetical protein; KEGG: pfa:PFD0950w 0.0017 ran binding protein 1 K03864; COG: NOG36013 non supervised orthologous group.
  
     0.655
EDR45506.1
Hypothetical protein; COG: NOG13188 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.608
EDR47518.1
Hypothetical protein; KEGG: rno:309804 1.3e-25 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: COG1340 Uncharacterized archaeal coiled-coil protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.595
EDR47475.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.558
EDR47470.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.554
EDR47482.1
Transporter gate domain protein; COG: COG0700 Uncharacterized membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.544
EDR47478.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.542
EDR46203.1
Hypothetical protein; COG: KOG3704 Heparan sulfate D-glucosaminyl 3-O-sulfotransferase; Psort location: CytoplasmicMembrane, score: 7.63.
  
     0.521
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.