STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR47510.1Hypothetical protein; KEGG: nme:NMB0700 1.4e-14 IgA-specific serine endopeptidase K01347; COG: COG1340 Uncharacterized archaeal coiled-coil protein; Psort location: Extracellular, score: 7.62. (460 aa)    
Predicted Functional Partners:
EDR47253.1
Interferon-induced transmembrane protein; KEGG: btk:BT9727_2122 3.3e-06 pbp1A; penicillin-binding protein 1A K05366; COG: NOG16607 non supervised orthologous group.
 
  
 0.839
EDR48087.1
Putative phage capsid family; COG: NOG20168 non supervised orthologous group.
   
   0.708
EDR46541.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: vfi:VF0494 1.4e-45 sensory transduction protein kinase; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.565
EDR47508.1
Hypothetical protein; KEGG: aci:ACIAD2995 4.2e-46 putative methyltransferase K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score: 8.87.
     
 0.541
EDR46191.1
Hypothetical protein; COG: COG1716 FOG: FHA domain; Psort location: Cytoplasmic, score: 8.87.
  
    0.536
EDR47509.1
Hypothetical protein; KEGG: ljo:LJ1840 0.0021 cell wall-associated serine proteinase K01361; Psort location: Cytoplasmic, score: 8.87.
       0.520
EDR46080.1
NlpC/P60 family protein; KEGG: bat:BAS5084 6.5e-18 N-acetylmuramoyl-L-alanine amidase, C-terminus K01446; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.55.
     
 0.495
EDR47810.1
Trypsin; KEGG: chy:CHY_0655 3.0e-59 htrA; serine protease Do; COG: COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
 
 
 0.480
EDR48617.1
Replication initiation factor; COG: COG2946 Putative phage replication protein RstA.
  
     0.471
EDR46233.1
KEGG: saa:SAUSA300_2505 6.3e-20 acetyltransferase, GNAT family K00680; COG: NOG18266 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.464
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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