Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR47531.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
EDR47530.1
Hypothetical protein; KEGG: tde:TDE1381 5.3e-23 atpE; V-type ATPase, E subunit K02121; COG: COG1390 Archaeal/vacuolar-type H+-ATPase subunit E; Psort location: Cytoplasmic, score: 8.87.
 
     0.942
EDR47534.1
KEGG: tde:TDE1681 9.7e-47 atpD; V-type ATPase, D subunit K02120; COG: COG1394 Archaeal/vacuolar-type H+-ATPase subunit D; Psort location: Cytoplasmic, score: 8.87.
 
     0.929
EDR47535.1
KEGG: bbu:BB0091 5.8e-72 V-type ATPase, subunit I, putative K02123; COG: COG1269 Archaeal/vacuolar-type H+-ATPase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.921
EDR47536.1
KEGG: tde:TDE1679 9.9e-38 atpK; V-type ATPase, K subunit K02124; COG: COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.912
atpB-2
ATP synthase alpha/beta family, nucleotide-binding domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
     0.907
atpA-2
ATP synthase alpha/beta family, nucleotide-binding domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
     0.872
EDR47529.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.548
EDR47537.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.437
EDR47538.1
Hypothetical protein.
       0.437
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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