STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpA-2ATP synthase alpha/beta family, nucleotide-binding domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (576 aa)    
Predicted Functional Partners:
EDR47530.1
Hypothetical protein; KEGG: tde:TDE1381 5.3e-23 atpE; V-type ATPase, E subunit K02121; COG: COG1390 Archaeal/vacuolar-type H+-ATPase subunit E; Psort location: Cytoplasmic, score: 8.87.
 
 0.999
atpB-2
ATP synthase alpha/beta family, nucleotide-binding domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
0.999
EDR47534.1
KEGG: tde:TDE1681 9.7e-47 atpD; V-type ATPase, D subunit K02120; COG: COG1394 Archaeal/vacuolar-type H+-ATPase subunit D; Psort location: Cytoplasmic, score: 8.87.
 
 0.999
EDR47535.1
KEGG: bbu:BB0091 5.8e-72 V-type ATPase, subunit I, putative K02123; COG: COG1269 Archaeal/vacuolar-type H+-ATPase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EDR47536.1
KEGG: tde:TDE1679 9.9e-38 atpK; V-type ATPase, K subunit K02124; COG: COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EDR46243.1
KEGG: ctc:CTC02332 8.6e-39 V-type sodium ATP synthase subunit C K02119; COG: COG1527 Archaeal/vacuolar-type H+-ATPase subunit C; Psort location: Cytoplasmic, score: 8.87.
  
 0.998
EDR46246.1
KEGG: mth:MTH956 6.4e-11 ATP synthase, subunit F K02122; COG: COG1436 Archaeal/vacuolar-type H+-ATPase subunit F; Psort location: Cytoplasmic, score: 8.87.
 
 0.998
atpD-2
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.998
EDR46244.1
V-type ATPase 116kDa subunit family protein; KEGG: ctc:CTC02331 7.0e-76 V-type sodium ATP synthase subunit I K02123; COG: COG1269 Archaeal/vacuolar-type H+-ATPase subunit I; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.997
atpB-3
ATP synthase ab domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
0.997
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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