STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47545.1Putative L-ribulose-5-phosphate 4-epimerase; KEGG: chy:CHY_1555 1.4e-36 fucA2; L-fuculose phosphate aldolase K01628; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; Psort location: Cytoplasmic, score: 8.87. (215 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.946
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.898
xylB
Xylulokinase; KEGG: mta:Moth_2025 8.6e-110 xylulokinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.858
fba
KEGG: cpf:CPF_1557 1.0e-113 fba; fructose-1,6-bisphosphate aldolase, class II K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.821
EDR47541.1
Carbohydrate kinase, FGGY family protein; KEGG: cpf:CPF_1049 1.1e-70 fucK; L-fuculokinase K00879; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.809
rpe
KEGG: cpe:CPE1736 1.1e-59 ribulose-phosphate 3-epimerase K01783; COG: COG0036 Pentose-5-phosphate-3-epimerase; Psort location: Cytoplasmic, score: 8.87.
     
 0.808
uxaC
Glucuronate isomerase; KEGG: cac:CAC0692 1.2e-149 uxaC; glucuronate isomerase K01812; COG: COG1904 Glucuronate isomerase; Psort location: Cytoplasmic, score: 8.87.
     
 0.769
EDR48621.1
KEGG: cpr:CPR_0750 2.5e-231 beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Psort location: Cytoplasmic, score: 8.87.
   
 
  0.733
EDR47244.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: lsl:LSL_0710 1.4e-68 oxidoreductase K00100; COG: COG0656 Aldo/keto reductases, related to diketogulonate reductase; Psort location: Cytoplasmic, score: 8.87.
    
 0.729
EDR47542.1
ABC transporter, ATP-binding protein; KEGG: tte:TTE0763 1.3e-122 mglA4; ABC-type sugar (aldose) transport system, ATPase component K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
    0.712
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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