STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47600.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (55 aa)    
Predicted Functional Partners:
EDR47599.1
Hypothetical protein.
       0.773
EDR47598.1
Hypothetical protein.
       0.737
EDR47601.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.723
EDR47602.1
Hypothetical protein; KEGG: reh:H16_A3086 0.0054 ABC-type transporter, ATPase component.
       0.723
EDR47603.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.433
EDR47604.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.433
EDR47605.1
Hypothetical protein; KEGG: xoo:XOO1041 9.3e-10 rnhA; ribonuclease H K03469; COG: COG0328 Ribonuclease HI; Psort location: Cytoplasmic, score: 8.87.
       0.433
EDR47606.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.433
EDR47607.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.433
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.