STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47603.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (245 aa)    
Predicted Functional Partners:
EDR47605.1
Hypothetical protein; KEGG: xoo:XOO1041 9.3e-10 rnhA; ribonuclease H K03469; COG: COG0328 Ribonuclease HI; Psort location: Cytoplasmic, score: 8.87.
       0.785
EDR47607.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.778
EDR47604.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR47606.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR47610.1
Hypothetical protein.
       0.610
EDR47609.1
ParB-like protein; KEGG: pub:SAR11_0354 4.0e-08 parB; chromosome partitioning protein K03497; COG: COG1475 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87; Belongs to the ParB family.
       0.607
EDR47608.1
Hypothetical protein; KEGG: spi:MGAS10750_Spy0587 1.3e-33 methyltransferase K00599; COG: NOG11045 non supervised orthologous group.
       0.592
EDR47601.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.459
EDR47602.1
Hypothetical protein; KEGG: reh:H16_A3086 0.0054 ABC-type transporter, ATPase component.
       0.459
EDR47611.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.459
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.