STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR47627.1Phage terminase, large subunit, PBSX family; COG: COG1783 Phage terminase large subunit; Psort location: Cytoplasmic, score: 8.87. (670 aa)    
Predicted Functional Partners:
EDR47629.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.868
EDR47628.1
Putative phage minor capsid protein; COG: NOG25118 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.855
EDR47631.1
Hypothetical protein; COG: NOG36366 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.639
EDR47640.1
Phage tail tape measure protein, TP901 family; KEGG: cal:orf19.4072 8.4e-09 HYR10; similar to cell surface flocculin K01186; COG: COG5283 Phage-related tail protein; Psort location: Cellwall, score: 9.17.
 
    0.631
EDR47639.1
Bacteriophage Gp15 protein; COG: NOG24969 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.511
EDR47625.1
Site-specific recombinase, phage integrase family; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family.
 
     0.502
EDR47632.1
Hypothetical protein.
 
     0.439
EDR47630.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.427
EDR48092.1
Phage minor capsid protein; COG: NOG25118 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.413
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.